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Test Code LAB7430 Human Herpesvirus 6 PCR Quantitative

Performing Section

Microbiology

Purpose/Principle

Quantitative HHV-6 DNA PCR can be used to diagnose primary infections, track the course of infection, and monitor response to treatment.
In this assay, DNA is extracted from patient samples and subject to real-time PCR amplification using primers and a dual-labeled fluorescent probe directed against a sequence of the HHV-6 U67 gene. The product is detected using the 5’ – nuclease methodology and quantitated by extrapolation to a standard curve of log10 dilutions of a plasmid containing the target sequence. The assay is linear across six orders of magnitude and can detect as few as 2.5 copies per reaction. An exogenous positive control with its own set of primers and probes is co-amplified in each reaction to detect inhibition.

Special Collection Notes

Collect specimen according to standard operating procedure.

Specimen Type

CSF:

CSF Tube

Sterile screw capped container

 

Blood:

Purple Top Tube- EDTA

Specimen Volume

CSF

Preferred: 1.5 mL

Minimum: 1.0 mL

 

Whole Blood

Preferred: 4.0 mL

Minimum: 0.7 mL

Processing Instructions

DO NOT CENTRIFUGE.
Store and send ambient STAT.
If transport is longer than 4 hours, send same day or overnighted on wet ice.

Temperature

Ambient (unless >4 hour then Refrigerated)

Test Components

HHV6 PCR Quantitative
HHV6 PCR Quant Value
HHV6 PCR Quant Tissue Value

Reference Range

HHV6 PCR Quantitative

No HHV6 detected

 

HHV6 PCR Quant Value

Less than 60 copies/mL

 

HHV6 PCR Quant Tissue Value

<1 copies per 500ng DNA

TAT

96 Hours

Sample Stability

Ambient: 4 hours
Refrigerated: 72 hours

Additional Notes

Sources that require approval:

-Bone marrow aspirate (0.6 mL min)

-Body fluid and aspirate including BAL, unspun (0.6 mL min)

-Tissue-fragment, fresh, or frozen (1mm^3)

1. Frozen tissue should be kept on dry ice or stored at -70°C until processed.

2. Fresh tissue should be stored at 2-8?C in physiological saline or a suitable transport medium and processed as soon as possible.

3. FFPE (Formalin Fixed Paraffin Embedded) tissue may be tested but is less desirable due to decreased sensitivity related to formalin fixation.

 

Specimen will be rejected if clotted.

Aliases

HHV6 PCR Quant

CPT

87533